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Scindices / google-deepmind--alphafold

Open source code for AlphaFold 2.

status-active lang-python interface-cli method-deep-learning role-application domain-structural-biology entity-protein status-published scope-focused domain-drug-discovery entity-complex interface-gpu task-structure-prediction

Updated Apr 22, 2026
Python

Scindices / bytedance--Protenix

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Toward High-Accuracy Open-Source Biomolecular Structure Prediction.

status-active lang-python interface-cli method-deep-learning role-application domain-structural-biology entity-protein entity-small-molecule interface-api status-published status-packaged-pypi scope-focused domain-drug-discovery entity-complex entity-nucleic-acid interface-gpu lang-cuda method-diffusion task-structure-prediction

Updated May 6, 2026
Python

Scindices / Biohub--esm

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status-active lang-python domain-bioinformatics interface-cli method-deep-learning role-framework domain-structural-biology entity-protein interface-api status-published scope-swissknife method-language-model task-sequence-analysis entity-sequence task-structure-prediction task-protein-design

Updated Jul 28, 2026
Jupyter Notebook

Scindices / RosettaCommons--RoseTTAFold

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This package contains deep learning models and related scripts for RoseTTAFold

lang-python status-archived interface-cli method-deep-learning role-application domain-structural-biology entity-protein status-published scope-focused entity-complex interface-gpu task-structure-prediction

Updated Feb 15, 2024
Python

Scindices / sokrypton--ColabFold

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Making Protein folding accessible to all!

status-active lang-python interface-cli method-deep-learning role-application domain-structural-biology entity-protein interface-jupyter status-published status-packaged-pypi status-packaged-conda scope-focused entity-complex interface-gpu task-structure-prediction

Updated Jul 25, 2026
Jupyter Notebook

Scindices / jwohlwend--boltz

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Official repository for the Boltz biomolecular interaction models

status-active lang-python interface-cli method-deep-learning role-application domain-structural-biology entity-protein entity-small-molecule interface-api status-published status-packaged-pypi scope-focused domain-drug-discovery entity-complex entity-nucleic-acid interface-gpu method-diffusion task-structure-prediction

Updated May 29, 2026
Python

Scindices / aqlaboratory--openfold

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Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

status-active lang-python interface-cli method-deep-learning role-framework domain-structural-biology entity-protein interface-api status-published scope-focused entity-complex interface-gpu lang-cuda task-structure-prediction

Updated Dec 16, 2025
Python

Scindices / google-deepmind--alphafold3

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AlphaFold 3 inference pipeline.

status-active lang-python lang-cpp interface-cli method-deep-learning role-application domain-structural-biology entity-protein entity-small-molecule status-published scope-focused domain-drug-discovery entity-complex entity-nucleic-acid interface-gpu method-diffusion task-structure-prediction

Updated Jul 28, 2026
Python

Scindices / baker-laboratory--RoseTTAFold-All-Atom

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status-active lang-python interface-cli method-deep-learning role-application domain-structural-biology entity-protein entity-small-molecule status-published scope-focused domain-drug-discovery entity-complex entity-nucleic-acid interface-gpu task-structure-prediction

Updated May 18, 2026
Python

Scindices / chaidiscovery--chai-lab

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Chai-1, SOTA model for biomolecular structure prediction

status-active lang-python interface-cli method-deep-learning role-application domain-structural-biology entity-protein entity-small-molecule interface-api status-published status-packaged-pypi scope-focused domain-drug-discovery entity-complex entity-nucleic-acid interface-gpu method-diffusion task-structure-prediction

Updated Jun 30, 2026
Python

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task-structure-prediction

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Scindices / google-deepmind--alphafold

Scindices / bytedance--Protenix

Scindices / Biohub--esm

Scindices / RosettaCommons--RoseTTAFold

Scindices / sokrypton--ColabFold

Scindices / jwohlwend--boltz

Scindices / aqlaboratory--openfold

Scindices / google-deepmind--alphafold3

Scindices / baker-laboratory--RoseTTAFold-All-Atom

Scindices / chaidiscovery--chai-lab

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