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tomdstanton/README.md

Hi, I'm Tom. 👋 Deploy Blog

💫 About Me:

  • 🔭 I’m currently working on Kaptive in the Wyres Lab.
  • 👯 I’m looking to collaborate on in silico serotyping databases.
  • 🤝 I’m looking for help with bacterial glycan structure curation.
  • 🌱 I’m currently learning polars 🐻‍❄️.
  • 💬 Ask me about solving biological problems with code.
  • ⚡ Fun fact: I'm fast as fuck boiiiiiii 🏃🏊🚴‍♀️.

🌐 Socials

Bluesky Instagram LinkedIn Stack Overflow X email Google Scholar

💻 Tech Stack

Python R Rust Netlify FastAPI Streamlit SQLite Matplotlib Scipy Pandas NumPy scikit-learn PyTorch Plotly GitHub Git

📊 GitHub Stats



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  1. klebgenomics/Kaptive klebgenomics/Kaptive Public

    The tool for in silico serotyping

    Python 66 27

  2. pyfgs pyfgs Public

    🔗🐍⏭️ PyO3 bindings and Python interface to FragGeneScanRs, a gene prediction model for short and error-prone reads

    Python 7

  3. rammappy rammappy Public

    A Python interface to rammap, the Rust implementation of minimap2

    Rust 3