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lathulotus/README.md

Lathursha's Profile 🪷

Hi, I'm Lathursha! I'm a Master's student passionate about genetics, genomics, and bioinformatics!

About Me

🪴 Completed a Master's in Medical Genomics (MHSc) at the University of Toronto, where I explored variant interpretation, bioinformatics for medical research, and data science for clinical applications.

🌱 Background in Forensic Biology (HBSc) from the University of Toronto Mississauga, where I formally began using computational tools to solve biological challenges for forensic casework and population genetics.

🍀 Interested in leveraging bioinformatics to investigate complex diseases, to inform patient care, and to develop personalized treatment strategies.

Skills & Tools

  • Programming Languages: R, Python, Shell
  • Bioinformatics Tools: BLAST, Bioconductor, edgeR, HISAT2, HTSeq, Samtools, BEDTools, Ensembl, FastQC, VCFtools
  • Data Analysis: Tidyverse, ggplot2, dplyr, tidyr pandas, matplotlib, seaborn, PCA, factoextra, caret, randomForest
  • Version Control: Jupyter Notebooks, SciNet

Popular repositories Loading

  1. djerba_db_tools djerba_db_tools Public

    Python to write scripts for structured querying of Djerba-generated reports (JSON, HTML) stored on CouchDB.

    Python 1 1

  2. lathulotus lathulotus Public

    Config files for my GitHub profile.

  3. biostatistics biostatistics Public

    Shell and R for biostatistics: simulating tests, assessing statistical significance, searching for biological variables.

    R

  4. populationGenetics populationGenetics Public

    Python and R to handle genetic database information related to forensic DNA profiles.

    Jupyter Notebook

  5. djerba djerba Public

    Forked from oicr-gsi/djerba

    Create cancer bioinformatics reports from metadata and workflow output

    Python

  6. RNAseq_analysis_ASMcells RNAseq_analysis_ASMcells Public

    Shell and R for RNA-seq profiling of ASM cells for analysis associated with chronic inflammatory diseases.

    HTML