Sync high-value al-folio features (theme/system, publications, charts, search, Docker) - #2
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- Dockerfile + docker-compose.yml: reproducible local build on pinned Ruby 3.2 (fixes host Ruby 4.0 dropping ostruct/bigdecimal/etc from default gems) - Gemfile: explicitly list ostruct/bigdecimal/csv/logger/faraday-retry for Ruby 4.x local builds (harmless on 3.2); add jekyll-jupyter-notebook - Remove obsolete .travis.yml and bin/cibuild, bin/deploy (deploy is via .github/workflows/deploy.yml) Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
The navbar toggle now cycles light -> dark -> system. In "system" mode the palette follows the OS prefers-color-scheme and updates live when it changes. The active setting drives which icon is shown (sun/moon/adjust). Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
- Colored venue badges driven by _data/venues.yml (color: per venue) - "Selected" star badge on selected publications - Client-side Altmetric donut + Dimensions citation-count badges, rendered only for entries with a DOI; toggled via enable_publication_badges in config Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
- Per-page opt-in loaders (front matter flags) for Chart.js, Plotly, Mermaid,
pseudocode.js (+KaTeX) and TikZJax, wired via _includes/scripts/diagrams.html
- jupyter_notebook include: embed pre-rendered notebook HTML or nbviewer in an
iframe (works without a local Jupyter toolchain); native {% jupyter_notebook %}
tag also available via jekyll-jupyter-notebook when Jupyter is installed
- Demo post + self-contained notebook asset for QA (safe to delete)
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
- Cmd/Ctrl-K or a navbar search icon opens a command palette over pages, blog posts and projects - Toggled via enable_search in config; palette accent matches the theme Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Replace the Altmetric donut + Dimensions rectangle (inconsistent, sparse) with a clean shields.io "Cited by N" badge that links to each paper on Google Scholar — matching upstream al-folio's approach. - Tag each indexed paper with its google_scholar_id in papers.bib - _data/citations.yml holds the counts (seeded from the live Scholar profile) - bin/update_scholar_citations.py + .github/workflows/update-citations.yml refresh the counts weekly via `scholarly` (reads scholar_userid from _config.yml) - config flag enable_publication_badges.google_scholar Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
- Remove the "selected" star badge from publications - Remove per-venue badge colors (revert to the default badge style) - Mirror the resume in the WhiteCoat CV entry (labeled bullets: Business Impact, Data Architecture, AI Governance, Clinical GenAI, etc.) Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Keep the ninja-keys search feature in place but ship it disabled (enable_search: false); flip to true in _config.yml to turn it back on. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
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Ports five modern al-folio features onto the current (Bootstrap-4) fork by hand — no upstream merge — each as its own commit. Built and QA'd locally.
Features
Dockerfile+docker-compose.ymlpin Ruby 3.2 for reproducible local builds (fixes host Ruby 4.0 droppingostructetc.); Gemfile lists the stdlib shims for Ruby 4.x; removed obsolete.travis.ymlandbin/scripts. Deploy still via existing Actions.prefers-color-schemelive._data/citations.yml, auto-refreshed weekly by.github/workflows/update-citations.yml(bin/update_scholar_citations.py, usingscholarly). Default venue badges, no stars/colors.jupyter_notebookembed include. Demo post included (_posts/2024-06-01-visualizations-demo.md, safe to delete).enable_search: false) for now — flip totruein_config.ymlto enable.Notes
deploy.yml._data/citations.ymlwas seeded with live Scholar counts (SmoothTaylor 63, etc.); the weekly Action keeps it current (may hit Scholar CAPTCHA in CI — counts persist between successful runs).🤖 Generated with Claude Code