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8 changes: 8 additions & 0 deletions .gitignore
Original file line number Diff line number Diff line change
Expand Up @@ -23,3 +23,11 @@ notebooks/PathFinder_testing_results/
notebooks/Test/
dist/
notebooks/PathFinder_results/

# opencode artifacts
/.opencode/
/AGENTS.md
/.logs/

# agent-of-empires artifacts
/.agent-of-empires/
6 changes: 6 additions & 0 deletions README.md
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Expand Up @@ -19,6 +19,7 @@ Explore knowledge graphs in Translator<br>
Find neighbors in the Translator KGs for a given node <br>
Find paths between node A and node B in the Translator KG <br>
Find a subnetwork given a list of nodes in the Translator KG <br>
Experimental developer-friendly wrappers for resolving labels/CURIEs, caching Translator resources, and returning parsed finder results <br>
Connecting user's API with Translator API <br>


Expand Down Expand Up @@ -84,6 +85,11 @@ Example notebook for **[PathFinder](https://github.com/NCATSTranslator/Translato
#### Network finder
Example notebook for **[NetworkFinder](https://github.com/NCATSTranslator/Translator_component_toolkit/blob/main/notebooks/Neighborhood_finder_multiple_nodes.ipynb)**

#### Experimental API tutorial
Quick-start notebook for the experimental developer-friendly finder wrappers: **[Experimental API tutorial](https://github.com/NCATSTranslator/Translator_component_toolkit/blob/main/notebooks/Experimental_API_tutorial.ipynb)**

Use the detailed NeighborhoodFinder, PathFinder, NetworkFinder, KG overview, and visualization notebooks above when you need more fine-grained endpoint selection, predicate control, raw query construction, parser workflows, or visualization setup.


#### Connecting to a user's API
API should be developed following the standard from [TRAPI](https://github.com/NCATSTranslator/ReasonerAPI). <br>
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