betAS/NAMESPACE at dev · DiseaseTranscriptomicsLab/betAS · GitHub

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# Generated by roxygen2: do not edit by hand

export(CheckMinReads)
export(alternativeEvents)
export(betASapp)
export(bigPicturePlot)
export(convertCols)
export(estimateFDR)
export(fStatistic_2Groups_PerEvent)
export(filterEvents)
export(generalisedGroupsBetas)
export(getDataset)
export(getEvents)
export(getVastTools)
export(getWhippet)
export(getrMATS)
export(hc_theme_smpl_tailored)
export(individualBetas_nofitting_incr)
export(jointBetas_nofitting)
export(jointBetas_nofitting_Fast0)
export(plotDensitiesFromEventObjList)
export(plotFDRFromEventObjList)
export(plotFstatFromEventObjList)
export(plotFstatFromEventObjListMultiple)
export(plotIndividualDensities)
export(plotIndividualDensitiesList)
export(plotIndividualViolinsList)
export(plotPDiffFromEventObjList)
export(plotVolcano)
export(plotVolcanoFDR)
export(plotVolcanoFstat)
export(plotVolcano_MultipleGroups_Fstat)
export(plotVolcano_MultipleGroups_Pdiff)
export(preparePieForVastToolsCOMPLEX)
export(prepareTableEvent)
export(prepareTableEventMultiple)
export(prepareTableVolcano)
export(prepareTableVolcanoFDR)
export(prepareTableVolcanoFstat)
export(prepareTableVolcanoMultipleGroups)
import(ggplot2)
import(highcharter)
import(shiny)
import(shinycssloaders)
importFrom(DT,DTOutput)
importFrom(DT,datatable)
importFrom(DT,formatRound)
importFrom(DT,renderDT)
importFrom(bslib,bs_theme)
importFrom(colourpicker,colourInput)
importFrom(colourpicker,updateColourInput)
importFrom(ggrepel,geom_text_repel)
importFrom(ggridges,geom_density_ridges)
importFrom(grDevices,colorRampPalette)
importFrom(graphics,points)
importFrom(graphics,title)
importFrom(reshape2,melt)
importFrom(shiny,runApp)
importFrom(shiny,shinyApp)
importFrom(stats,density)
importFrom(stats,median)
importFrom(stats,rbeta)
importFrom(stats,rbinom)
importFrom(stats,sd)
importFrom(thematic,thematic_shiny)
importFrom(utils,combn)
importFrom(utils,read.table)